2FIC	Endocytosis Exocytosis, Membrane Protein	date	Dec 29, 2005
title	The Crystal Structure Of The Bar Domain From Human Bin1amph And Its Implications For Molecular Recognition
authors	E.Casal, L.Federici, W.Zhang, J.Fernandez-Recio, E.M.Priego, R.N. J.B.Duhadaway, G.C.Prendergast, B.F.Luisi, E.D.Laue
compound		source
Molecule: Myc Box-Dependent-Interacting Protein 1 Chain: A, B Fragment: Bar Domain Synonym: Amphiphysin II,Amphiphysin-Like Protein,Box-Depend Interacting Protein 1,Bridging Integrator 1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Bin1, Amphl Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet14b
symmetry	Space Group: P 1 21 1	R_factor 0.230 R_Free 0.280
crystal cell	length a length b length c angle alpha angle beta angle gamma 69.922 59.086 75.009 90.00 117.53 90.00
method	X-Ray Diffraction	resolution	1.99 Å
ligand	XE	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	The Crystal Structure of the BAR Domain from Human Bin1/Amphiphysin II and Its Implications for Molecular Recognition., Casal E, Federici L, Zhang W, Fernandez-Recio J, Priego EM, Miguel RN, Duhadaway JB, Prendergast GC, Luisi BF, Laue ED, Biochemistry. 2006 Oct 31;45(43):12917-12928. PMID:17059209

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk] Biological Unit Coordinates (2fic.pdb1.gz) 68 Kb Biological Unit Coordinates (2fic.pdb2.gz) 34 Kb Biological Unit Coordinates (2fic.pdb3.gz) 35 Kb LPC: Ligand-Protein Contacts for 2FIC CSU: Contacts of Structural Units for 2FIC Likely Quarternary Molecular Structure file(s) for 2FIC Structure Factors (267 Kb) Retrieve 2FIC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2FIC from S2C, [Save to disk] Re-refined 2fic structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2FIC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2FIC

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2FIC, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2fic_B] [2fic] [2fic_A] SWISS-PROT database: [O00499] Domain organization of [BIN1_HUMAN] by SWISSPFAM Domain found in 2FIC: [BAR ] by SMART

Other resources with information on 2FIC

Community annotation for 2FIC at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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