2FJX Transferase Dna date Jan 03, 2006
title Rt29 Bound To D(Cttgaatgcattcaag) In Complex With Mmlv Rt Ca Fragment
authors K.D.Goodwin, M.M.Georgiadis
compound source
Molecule: 5'-D(Cptptpgpapaptpg)-3'
Chain: B
Engineered: Yes
 Synthetic: Yes

Molecule: 5'-D(Pcpaptptpcpapapg)-3'
Chain: G
Engineered: Yes
Synthetic: Yes

Molecule: Reverse Transcriptase
Chain: A
Fragment: Rt Catalytic Domain
Synonym: Rt
Ec: 2.7.7.49
Engineered: Yes
Organism_scientific: Moloney Murine Leukemia Virus
Organism_taxid: 11801
Gene: Pol
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.234 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.749 145.450 46.855 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand HXL enzyme Transferase E.C.2.7.7.49 BRENDA
Primary referenceA high-throughput, high-resolution strategy for the study of site-selective DNA binding agents: Analysis of a "highly twisted" benzimidazole-diamidine., Goodwin KD, Lewis MA, Tanious FA, Tidwell RR, Wilson WD, Georgiadis MM, Long EC, J Am Chem Soc. 2006 Jun 21;128(24):7846-54. PMID:16771498
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (2fjx.pdb1.gz) 105 Kb
  • LPC: Ligand-Protein Contacts for 2FJX
  • CSU: Contacts of Structural Units for 2FJX
  • Likely Quarternary Molecular Structure file(s) for 2FJX
  • Structure Factors (249 Kb)
  • Retrieve 2FJX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FJX from S2C, [Save to disk]
  • Re-refined 2fjx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2FJX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2FJX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FJX, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fjx] [2fjx_A] [2fjx_G] [2fjx_B]
  • SWISS-PROT database: [P03355]
  • Domain organization of [POL_MLVMO] by SWISSPFAM
    • Other resources with information on 2FJX
  • Community annotation for 2FJX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science