2FMR	Rna Binding Protein	date	Oct 06, 1997
title	Kh1 From The Fragile X Protein Fmr1, Nmr, 18 Structures
authors	G.Musco, A.Kharrat, G.Stier, F.Fraternali, T.J.Gibson, M.Nilges, A
compound		source
Molecule: Fmr1 Protein Chain: A Fragment: First Kh Domain Residues 216 - 280 Synonym: Kh1 Engineered: Yes Other_details: Module From The Kh Family		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Cell_line: Bl21 Cellular_location: Cytoplasm Gene: Fmr1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet9 Other_details: Human Cdna Sequence Coding The First Domain Was Pcr Amplified And Sub-Cloned Into A Pet9 Derived Plasmi With C-Terminal His-Tag
method	Solution NMR
note	2FMR is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	The solution structure of the first KH domain of FMR1, the protein responsible for the fragile X syndrome., Musco G, Kharrat A, Stier G, Fraternali F, Gibson TJ, Nilges M, Pastore A, Nat Struct Biol 1997 Sep;4(9):712-6. PMID:9302998

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (304 Kb) [Save to disk] Biological Unit Coordinates (2fmr.pdb1.gz) 17 Kb CSU: Contacts of Structural Units for 2FMR Retrieve 2FMR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2FMR from S2C, [Save to disk]

View 2FMR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2FMR

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2FMR, from MSDmotif at EBI Genome occurence of 2FMR's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d2fmr__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2fmr_A] [2fmr] SWISS-PROT database: [Q06787] Domain organization of [FMR1_HUMAN] by SWISSPFAM Domain found in 2FMR: [KH ] by SMART

Other resources with information on 2FMR

Community annotation for 2FMR at PDBWiki (http://pdbwiki.org) NMR Ensemble (OLDERADO: core, domain and representative structure database) MMDB (Entrez's Structure Database)

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