2FOV Lyase date Jan 14, 2006
title Human Carbonic Anhydrase II Complexed With Two-Prong Inhibit
authors K.M.Jude, D.W.Christianson
compound source
Molecule: Carbonic Anhydrase II
Chain: A
Synonym: Carbonic Anhydrase II, Carbonate Dehydratase II, C Carbonic Anhydrase C;
Ec: 4.2.1.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ca2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 Codon Plus (De3) Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pma-5-8
symmetry Space Group: P 1 21 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.362 41.482 72.234 90.00 104.34 90.00
method X-Ray Diffractionresolution 1.15 Å
ligand B30, CCN, CMH, CU, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceUltrahigh resolution crystal structures of human carbonic anhydrases I and II complexed with "two-prong" inhibitors reveal the molecular basis of high affinity., Jude KM, Banerjee AL, Haldar MK, Manokaran S, Roy B, Mallik S, Srivastava DK, Christianson DW, J Am Chem Soc. 2006 Mar 8;128(9):3011-8. PMID:16506782
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (2fov.pdb1.gz) 98 Kb
  • LPC: Ligand-Protein Contacts for 2FOV
  • CSU: Contacts of Structural Units for 2FOV
  • Likely Quarternary Molecular Structure file(s) for 2FOV
  • Structure Factors (2218 Kb)
  • Retrieve 2FOV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FOV from S2C, [Save to disk]
  • Re-refined 2fov structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2FOV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FOV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FOV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fov_A] [2fov]
  • SWISS-PROT database: [P00918]
  • Domain organization of [CAH2_HUMAN] by SWISSPFAM
  • Domain found in 2FOV: [Carb_anhydrase ] by SMART
  • Other resources with information on 2FOV
  • Community annotation for 2FOV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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