2FWY Chaperone date Feb 03, 2006
title Structure Of Human Hsp90-Alpha Bound To The Potent Water Soluble Inhibitor Pu-H64
authors R.M.Immormino, D.T.Gewirth
compound source
Molecule: Heat Shock Protein Hsp 90-Alpha
Chain: A
Fragment: N-Terminal Domain Residues 1-236
Synonym: Hsp90 Protein
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hspca
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-15b
symmetry Space Group: I 2 2 2
R_factor 0.181 R_Free 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.609 90.586 98.034 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand H64 BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and quantum chemical studies of 8-aryl-sulfanyl adenine class Hsp90 inhibitors., Immormino RM, Kang Y, Chiosis G, Gewirth DT, J Med Chem. 2006 Aug 10;49(16):4953-60. PMID:16884307
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (2fwy.pdb1.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 2FWY
  • CSU: Contacts of Structural Units for 2FWY
  • Likely Quarternary Molecular Structure file(s) for 2FWY
  • Structure Factors (248 Kb)
  • Retrieve 2FWY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FWY from S2C, [Save to disk]
  • Re-refined 2fwy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2FWY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FWY
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2FWY, from MSDmotif at EBI
  • Fold representative 2fwy from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fwy_A] [2fwy]
  • SWISS-PROT database: [P07900]
  • Domain organization of [HS90A_HUMAN] by SWISSPFAM
  • Domain found in 2FWY: [HATPase_c ] by SMART
  • Alignments of the sequence of 2FWY with the sequences similar proteins can be viewed for 2FWY's classification [HS90A_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [HS90A_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2FWY
  • Community annotation for 2FWY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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