2FZD Oxidoreductase date Feb 09, 2006
title Human Aldose Reductase Complexed With Tolrestat At 1.08 A Re
authors H.Steuber, M.Zentgraf, C.Gerlach, C.A.Sotriffer, A.Heine, G.Klebe
compound source
Molecule: Aldose Reductase
Chain: A
Ec: 1.1.1.21
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Aldr1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 Gold
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet 15b
symmetry Space Group: P 1 21 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.450 66.679 46.060 90.00 92.45 90.00
method X-Ray Diffractionresolution 1.08 Å
ligand NAP, TOL BindingDB enzyme Oxidoreductase E.C.1.1.1.21 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • electron transfer activity
  • NADP-retinol dehydrogenase a...


  • Primary referenceExpect the Unexpected or Caveat for Drug Designers: Multiple Structure Determinations Using Aldose Reductase Crystals Treated under Varying Soaking and Co-crystallisation Conditions., Steuber H, Zentgraf M, Gerlach C, Sotriffer CA, Heine A, Klebe G, J Mol Biol. 2006 Oct 13;363(1):174-87. Epub 2006 Aug 9. PMID:16952371
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (2fzd.pdb1.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 2FZD
  • CSU: Contacts of Structural Units for 2FZD
  • Likely Quarternary Molecular Structure file(s) for 2FZD
  • Structure Factors (982 Kb)
  • Retrieve 2FZD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FZD from S2C, [Save to disk]
  • Re-refined 2fzd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2FZD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FZD
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FZD, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fzd_A] [2fzd]
  • SWISS-PROT database: [P15121]
  • Domain organization of [ALDR_HUMAN] by SWISSPFAM
  • Other resources with information on 2FZD
  • Community annotation for 2FZD at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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