2G27 Hydrolase date Feb 15, 2006
title Ketopiperazine-Based Renin Inhibitors: Optimization Of The "C" Ring
authors D.D.Holsworth, M.Jalaiea, E.Zhanga, P.Mcconnella
compound source
Molecule: Renin
Chain: A, B
Synonym: Angiotensinogenase
Ec: 3.4.23.15
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ren
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 3
R_factor 0.230 R_Free 0.310
crystal
cell
length a length b length c angle alpha angle beta angle gamma
141.411 141.411 141.411 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.90 Å
ligand 4LG enzyme Hydrolase E.C.3.4.23.15 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceKetopiperazine-based renin inhibitors: optimization of the "C" ring., Holsworth DD, Cai C, Cheng XM, Cody WL, Downing DM, Erasga N, Lee C, Powell NA, Edmunds JJ, Stier M, Jalaie M, Zhang E, McConnell P, Ryan MJ, Bryant J, Li T, Kasani A, Hall E, Subedi R, Rahim M, Maiti S, Bioorg Med Chem Lett. 2006 May 1;16(9):2500-4. Epub 2006 Feb 15. PMID:16480874
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (2g27.pdb1.gz) 54 Kb
  • Biological Unit Coordinates (2g27.pdb2.gz) 54 Kb
  • Biological Unit Coordinates (2g27.pdb3.gz) 157 Kb
  • LPC: Ligand-Protein Contacts for 2G27
  • CSU: Contacts of Structural Units for 2G27
  • Likely Quarternary Molecular Structure file(s) for 2G27
  • Structure Factors (182 Kb)
  • Retrieve 2G27 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2G27 from S2C, [Save to disk]
  • Re-refined 2g27 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2G27 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2G27
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2G27, from MSDmotif at EBI
  • Fold representative 2g27 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2g27_B] [2g27_A] [2g27]
  • SWISS-PROT database: [P00797]
  • Domain organization of [RENI_HUMAN] by SWISSPFAM
  • Other resources with information on 2G27
  • Community annotation for 2G27 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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