2G31 Signaling Protein date Feb 17, 2006
title Human Nogo-A Functional Domain: Nogo60
authors M.F.Li, J.X.Liu, J.X.Song
compound source
Molecule: Reticulon-4
Chain: A
Fragment: C_terminal Domain
Synonym: Nogo_a, Neurite Outgrowth Inhibitor, Nogo Protein, Foocen, Neuroendocrine-Specific Protein, Nsp, Neuroendocrine-Specific Protein C Homolog, Rtn-X, Reticulon-5;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Tissue: Brain
Gene: Nogo
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32a
methodSolution NMR
Primary referenceNogo goes in the pure water: solution structure of Nogo-60 and design of the structured and buffer-soluble Nogo-54 for enhancing CNS regeneration., Li M, Liu J, Song J, Protein Sci. 2006 Aug;15(8):1835-41. PMID:16877707
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (305 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2G31
  • Original NMR restraints for 2G31 from PDB
  • Retrieve 2G31 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2G31 from S2C, [Save to disk]
  • View 2G31 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2G31
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2G31, from MSDmotif at EBI
  • Fold representative 2g31 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2g31] [2g31_A]
  • SWISS-PROT database: [Q9NQC3]
  • Domain organization of [RTN4_HUMAN] by SWISSPFAM
  • Other resources with information on 2G31
  • Community annotation for 2G31 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science