2G6P	Hydrolase	date	Feb 24, 2006
title	Crystal Structure Of Truncated (Delta 1-89) Human Methionine Aminopeptidase Type 1 In Complex With Pyridyl Pyrimidine De
authors	A.Addlagatta, X.Hu, J.O.Liu, B.W.Matthews
compound		source
Molecule: Methionine Aminopeptidase 1 Chain: A Fragment: Residues 81-384 Synonym: Metap 1, Map 1, Peptidase M 1 Ec: 3.4.11.18 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Metap1, Kiaa0094 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.193 R_Free 0.241
crystal cell	length a length b length c angle alpha angle beta angle gamma 47.386 77.522 47.720 90.00 90.82 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	CO, EPE, GOL, HM2, K	enzyme	Hydrolase E.C.3.4.11.18 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Identification of Pyridinylpyrimidines as Inhibitors of Human Methionine Aminopeptidases., Hu X, Addlagatta A, Matthews BW, Liu JO, Angew Chem Int Ed Engl. 2006 Jun 2;45(23):3772-3775. PMID:16724298

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk] Biological Unit Coordinates (2g6p.pdb1.gz) 53 Kb LPC: Ligand-Protein Contacts for 2G6P CSU: Contacts of Structural Units for 2G6P Likely Quarternary Molecular Structure file(s) for 2G6P Structure Factors (437 Kb) Retrieve 2G6P in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2G6P from S2C, [Save to disk] Re-refined 2g6p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2G6P in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2G6P

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2G6P, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2g6p] [2g6p_A] SWISS-PROT database: [P53582] Domain organization of [AMPM1_HUMAN] by SWISSPFAM

Other resources with information on 2G6P

Community annotation for 2G6P at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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