2GCP Signaling Protein date Mar 14, 2006
title Crystal Structure Of The Human Rhoc-Gsp Complex
authors S.M.G.Dias, R.A.Cerione
compound source
Molecule: Rho-Related Gtp-Binding Protein Rhoc
Chain: A
Synonym: Rho Cdna Clone 9, H9
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Arh9, Arhc, Rhoc
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3) Rp
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28
symmetry Space Group: P 43 21 2
R_factor 0.159 R_Free 0.226
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.435 59.435 138.090 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.15 Å
ligand EDO, GSP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray Crystal Structures Reveal Two Activated States for RhoC(,)., Dias SM, Cerione RA, Biochemistry. 2007 Jun 5;46(22):6547-58. Epub 2007 May 12. PMID:17497936
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (2gcp.pdb1.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 2GCP
  • CSU: Contacts of Structural Units for 2GCP
  • Likely Quarternary Molecular Structure file(s) for 2GCP
  • Structure Factors (109 Kb)
  • Retrieve 2GCP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GCP from S2C, [Save to disk]
  • Re-refined 2gcp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GCP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GCP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GCP, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gcp_A] [2gcp]
  • SWISS-PROT database: [Q62159]
  • Domain organization of [RHOC_MOUSE] by SWISSPFAM
  • Domain found in 2GCP: [RHO ] by SMART
  • Other resources with information on 2GCP
  • Community annotation for 2GCP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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