2GD3 Unknown Function date Mar 15, 2006
title Nmr Structure Of S14g-Humanin In 30% Tfe Solution
authors D.Benaki, C.Zikos, A.Evangelou, E.Livaniou, M.Vlassi, E.Mikros, M.
compound source
Molecule: Humanin
Chain: A
Engineered: Yes
Mutation: Yes
 Synthetic: Yes
Other_details: S14g-Humanin Was Prepared By Fmoc-Solid Phas Synthesis On O-Cl-Trityl-Amidomethyl Polystyrene Resin (Eva A., Zikos, C., Livaniou, E., Evangelatos, G.P. "Highyield, Phase Synthesis Of Humanin, An Alzheimer'S Disease Associat 24-Mer Peptide Which Contains A Difficult Sequence" J. Pept 2004, 10, 631 635). The Peptide Was Purified To 95% With Se Preparative Rp-Hplc And Suitably Characterized. The Sequenc Naturally Found In Homo Sapiens (Human).
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • receptor antagonist activity...


    • Primary referenceSolution structure of Ser14Gly-humanin, a potent rescue factor against neuronal cell death in Alzheimer's disease., Benaki D, Zikos C, Evangelou A, Livaniou E, Vlassi M, Mikros E, Pelecanou M, Biochem Biophys Res Commun. 2006 Oct 20;349(2):634-42. Epub 2006 Aug 23. PMID:16945331
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk]
  • Biological Unit Coordinates (2gd3.pdb1.gz) 7 Kb
  • CSU: Contacts of Structural Units for 2GD3
  • Original NMR restraints for 2GD3 from PDB
  • Retrieve 2GD3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GD3 from S2C, [Save to disk]
    • View 2GD3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2GD3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GD3, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gd3_A] [2gd3]
  • SWISS-PROT database: [Q8IVG9]
  • Domain organization of [HUNIN_HUMAN] by SWISSPFAM
    • Other resources with information on 2GD3
  • Community annotation for 2GD3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science