2GD4		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BDP, BMA, CA, IDS, MAN, NAG, SGN, SUS, ZDO	enzyme
Gene Ontology	Chain Function Process Component C, I H, B
Primary reference	Antithrombin-S195A factor Xa-heparin structure reveals the allosteric mechanism of antithrombin activation., Johnson DJ, Li W, Adams TE, Huntington JA, EMBO J. 2006 May 3;25(9):2029-37. Epub 2006 Apr 13. PMID:16619025

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (233 Kb) [Save to disk] Biological Unit Coordinates (2gd4.pdb1.gz) 115 Kb Biological Unit Coordinates (2gd4.pdb2.gz) 113 Kb LPC: Ligand-Protein Contacts for 2GD4 CSU: Contacts of Structural Units for 2GD4 Likely Quarternary Molecular Structure file(s) for 2GD4 Structure Factors (282 Kb) Retrieve 2GD4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2GD4 from S2C, [Save to disk] Re-refined 2gd4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2GD4 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2gd4] [2gd4_A] [2gd4_B] [2gd4_C] [2gd4_H] [2gd4_I] [2gd4_L] SWISS-PROT database: [P01008] [P00742] Domains found in 2GD4: [EGF] [SERPIN] [Tryp_SPc ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---