2GGZ Lyase Activator date Mar 24, 2006
title Crystal Structure Of Human Guanylate Cyclase Activating Prot
authors R.Stephen
compound source
Molecule: Guanylyl Cyclase-Activating Protein 3
Chain: A, B
Synonym: Gcap 3, Guanylate Cyclase Activator 1c
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pms261
symmetry Space Group: P 43
R_factor 0.256 R_Free 0.290
crystal
cell
length a length b length c angle alpha angle beta angle gamma
88.190 88.190 71.020 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand CA enzyme
note 2GGZ is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • calcium sensitive guanylate ...


    • Primary referenceThe Crystal Structure of GCAP3 Suggests Molecular Mechanism of GCAP-linked Cone Dystrophies., Stephen R, Palczewski K, Sousa MC, J Mol Biol. 2006 Jun 2;359(2):266-75. Epub 2006 Apr 3. PMID:16626734
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (2ggz.pdb1.gz) 28 Kb
  • Biological Unit Coordinates (2ggz.pdb2.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 2GGZ
  • CSU: Contacts of Structural Units for 2GGZ
  • Likely Quarternary Molecular Structure file(s) for 2GGZ
  • Structure Factors (84 Kb)
  • Retrieve 2GGZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GGZ from S2C, [Save to disk]
  • Re-refined 2ggz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2GGZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2GGZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GGZ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ggz_A] [2ggz] [2ggz_B]
  • SWISS-PROT database: [O95843]
  • Domain organization of [GUC1C_HUMAN] by SWISSPFAM
  • Domain found in 2GGZ: [EFh ] by SMART
    • Other resources with information on 2GGZ
  • Community annotation for 2GGZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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