2GHT	Hydrolase	date	Mar 27, 2006
title	Ctd-Specific Phosphatase Scp1 In Complex With Peptide From C Domain Of Rna Polymerase II
authors	Y.Zhang, J.P.Noel
compound		source
Molecule: Carboxy-Terminal Domain Rna Polymerase II Polypep Small Phosphatase 1; Chain: A, B Synonym: Nuclear Lim Interactor-Interacting Factor 3, Nli-I Factor 3, Nli-If; Ec: 3.1.3.16 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ctdsp1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28 Derivative
Molecule: Dna-Directed Rna Polymerase II Largest Subunit Chain: C, D Synonym: Rpb1 Ec: 2.7.7.6 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.216 R_Free 0.232
crystal cell	length a length b length c angle alpha angle beta angle gamma 125.916 78.787 62.948 90.00 112.08 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	MG, SEP	enzyme	Hydrolase E.C.3.1.3.16 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Determinants for dephosphorylation of the RNA polymerase II C-terminal domain by Scp1., Zhang Y, Kim Y, Genoud N, Gao J, Kelly JW, Pfaff SL, Gill GN, Dixon JE, Noel JP, Mol Cell. 2006 Dec 8;24(5):759-70. PMID:17157258

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk] Biological Unit Coordinates (2ght.pdb1.gz) 33 Kb Biological Unit Coordinates (2ght.pdb2.gz) 34 Kb LPC: Ligand-Protein Contacts for 2GHT CSU: Contacts of Structural Units for 2GHT Likely Quarternary Molecular Structure file(s) for 2GHT Structure Factors (496 Kb) Retrieve 2GHT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2GHT from S2C, [Save to disk] Re-refined 2ght structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2GHT in 3D

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Visual 3D analysis of 2GHT

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2GHT, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ght] [2ght_A] [2ght_C] [2ght_D] [2ght_B] SWISS-PROT database: [Q9GZU7] [P24928] Domain organization of [CTDS1_HUMAN] [RPB1_HUMAN] by SWISSPFAM Domain found in 2GHT: [CPDc ] by SMART

Other resources with information on 2GHT

Community annotation for 2GHT at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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