2GIS Structure of the S-adenosylmethionine riboswitch mRNA regulatory element date
authors Montange, R.K., Batey, R.T.
compound source
symmetry
R_factor
R_Free 0.289
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.90
ligand IRI, MG, SAM enzyme
Primary referenceStructure of the S-adenosylmethionine riboswitch regulatory mRNA element., Montange RK, Batey RT, Nature. 2006 Jun 29;441(7097):1172-5. PMID:16810258
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (2gis.pdb1.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 2GIS
  • CSU: Contacts of Structural Units for 2GIS
  • Likely Quarternary Molecular Structure file(s) for 2GIS
  • Structure Factors (121 Kb)
  • Retrieve 2GIS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GIS from S2C, [Save to disk]
  • Re-refined 2gis structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GIS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GIS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GIS, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gis_A] [2gis]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2GIS
  • Community annotation for 2GIS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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