2GLQ	Hydrolase	date	Apr 05, 2006
title	X-Ray Structure Of Human Alkaline Phosphatase In Complex Wit Strontium
authors	P.Llinas, M.Masella, T.Stigbrand, A.Menez, E.A.Stura, M.H.Le Du
compound		source
Molecule: Alkaline Phosphatase, Placental Type Chain: A Synonym: Placental Alkaline Phosphatase, Plap-1, Regan Isoz Ec: 3.1.3.1		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: C 2 2 21	R_factor 0.148 R_Free 0.188
crystal cell	length a length b length c angle alpha angle beta angle gamma 89.090 115.299 107.320 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	MG, NAG, SEP, SR, ZN	enzyme	Hydrolase E.C.3.1.3.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structural studies of human alkaline phosphatase in complex with strontium: implication for its secondary effect in bones., Llinas P, Masella M, Stigbrand T, Menez A, Stura EA, Le Du MH, Protein Sci. 2006 Jul;15(7):1691-700. PMID:16815919

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (171 Kb) [Save to disk] Biological Unit Coordinates (2glq.pdb1.gz) 327 Kb LPC: Ligand-Protein Contacts for 2GLQ CSU: Contacts of Structural Units for 2GLQ Likely Quarternary Molecular Structure file(s) for 2GLQ Structure Factors (1079 Kb) Retrieve 2GLQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2GLQ from S2C, [Save to disk] Re-refined 2glq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2GLQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2GLQ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2GLQ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2glq_A] [2glq] SWISS-PROT database: [P05187] Domain organization of [PPB1_HUMAN] by SWISSPFAM Domain found in 2GLQ: [alkPPc ] by SMART

Other resources with information on 2GLQ

Community annotation for 2GLQ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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