2GRY Transport Protein date Apr 25, 2006
title Crystal Structure Of The Human Kif2 Motor Domain In Complex
authors J.Wang, Y.Shen, W.Tempel, R.Landry, C.H.Arrowsmith, A.M.Edwards, M.Sundstrom, J.Weigelt, A.Bochkarev, H.Park, Structural Genomic Consortium (Sgc)
compound source
Molecule: Kinesin-Like Protein Kif2
Chain: A
Fragment: Kif2 Motor Domain
Synonym: Kinesin-2, Hk2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kif2, Kns2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21-Codonplus (De-3)-Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P28a-Lic
symmetry Space Group: H 3 2
R_factor 0.222 R_Free 0.283
length a length b length c angle alpha angle beta angle gamma
121.475 121.475 175.684 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.35 Å
ligand ADP, MG, UNX enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (2gry.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 2GRY
  • CSU: Contacts of Structural Units for 2GRY
  • Likely Quarternary Molecular Structure file(s) for 2GRY
  • Structure Factors (439 Kb)
  • Retrieve 2GRY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GRY from S2C, [Save to disk]
  • Re-refined 2gry structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GRY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GRY
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2GRY, from MSDmotif at EBI
  • Fold representative 2gry from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gry] [2gry_A]
  • SWISS-PROT database: [O00139]
  • Domain organization of [KIF2A_HUMAN] by SWISSPFAM
  • Domain found in 2GRY: [KISc ] by SMART
  • Other resources with information on 2GRY
  • Community annotation for 2GRY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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