2GSF Transferase date Apr 26, 2006
title The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region
authors J.R.Walker, T.Davis, A.Dong, E.M.Newman, F.Mackenzie, J.Weigelt, M.Sundstrom, C.H.Arrowsmith, A.M.Edwards, A.Bochkarev, S.Dhe- Paganon, Structural Genomics Consortium (Sgc)
compound source
Molecule: Ephrin Type-A Receptor 3
Chain: A
Fragment: Catalytic Domain, Juxtamembrane Region, Residues 577-947;
Synonym: Tyrosine-Protein Kinase Receptor Etk1, Hek, Hek4
Ec: 2.7.10.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Epha3, Etk, Etk1, Hek
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28-Lic
symmetry Space Group: P 1 21 1
R_factor 0.158 R_Free 0.195
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.163 38.274 76.333 90.00 102.39 90.00
method X-Ray Diffractionresolution 1.77 Å
ligand
enzyme Transferase E.C.2.7.10.1 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk]
  • Biological Unit Coordinates (2gsf.pdb1.gz) 98 Kb
  • CSU: Contacts of Structural Units for 2GSF
  • Likely Quarternary Molecular Structure file(s) for 2GSF
  • Structure Factors (482 Kb)
  • Retrieve 2GSF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GSF from S2C, [Save to disk]
  • Re-refined 2gsf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GSF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GSF
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2GSF, from MSDmotif at EBI
  • Fold representative 2gsf from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gsf_A] [2gsf]
  • SWISS-PROT database: [P29320]
  • Domain organization of [EPHA3_HUMAN] by SWISSPFAM
  • Domain found in 2GSF: [TyrKc ] by SMART
  • Other resources with information on 2GSF
  • Community annotation for 2GSF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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