2GSY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, Q, P, N, B, E, J, K, S, R, D, C, H, T, M, G, O, L, I, F


Primary referenceThe 2.6-Angstrom structure of infectious bursal disease virus-derived T=1 particles reveals new stabilizing elements of the virus capsid., Garriga D, Querol-Audi J, Abaitua F, Saugar I, Pous J, Verdaguer N, Caston JR, Rodriguez JF, J Virol. 2006 Jul;80(14):6895-905. PMID:16809295
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1247 Kb) [Save to disk]
  • Biological Unit Coordinates (2gsy.pdb1.gz) 3676 Kb
  • LPC: Ligand-Protein Contacts for 2GSY
  • CSU: Contacts of Structural Units for 2GSY
  • Likely Quarternary Molecular Structure file(s) for 2GSY
  • Structure Factors (5631 Kb)
  • Retrieve 2GSY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GSY from S2C, [Save to disk]
  • Re-refined 2gsy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2GSY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gsy] [2gsy_A] [2gsy_B] [2gsy_C] [2gsy_D] [2gsy_E] [2gsy_F] [2gsy_G] [2gsy_H] [2gsy_I] [2gsy_J] [2gsy_K] [2gsy_L] [2gsy_M] [2gsy_N] [2gsy_O] [2gsy_P] [2gsy_Q] [2gsy_R] [2gsy_S] [2gsy_T]
  • SWISS-PROT database: [P61825]
  • Belongs to the bursal disease virus pore-forming peptide, pep46 (pep46) family according to TCDB.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science