2GUD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACE, BMA, EDO, MAN, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDomain-swapped structure of the potent antiviral protein griffithsin and its mode of carbohydrate binding., Ziolkowska NE, O'Keefe BR, Mori T, Zhu C, Giomarelli B, Vojdani F, Palmer KE, McMahon JB, Wlodawer A, Structure. 2006 Jul;14(7):1127-35. PMID:16843894
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (2gud.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 2GUD
  • CSU: Contacts of Structural Units for 2GUD
  • Likely Quarternary Molecular Structure file(s) for 2GUD
  • Structure Factors (1016 Kb)
  • Retrieve 2GUD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GUD from S2C, [Save to disk]
  • Re-refined 2gud structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GUD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gud] [2gud_A] [2gud_B]
  • SWISS-PROT database: [P84801]
  • Domain found in 2GUD: [Jacalin ] by SMART

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