2GUT	Transcription	date	May 01, 2006
title	Solution Structure Of The Trans-Activation Domain Of The Hum Activator Arc105
authors	B.W.Vought, Z.Y.Jim Sun, S.G.Hyberts, G.Wagner, A.M.Naar
compound		source
Molecule: Arcmediator, Positive Cofactor 2 Glutamineq-Ric Associated Protein; Chain: A Fragment: Arcmediator Kix Domain, Residues 5-78 Synonym: Pc2 Glutamineq-Rich-Associated Protein, Tpa-Induc Protein, Tig-1, Activator-Recruited Cofactor 105 Kda Comp Arc105, Ctg Repeat Protein 7a; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pcqap, Arc105, Ctg7a, Tig1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet24
method	Solution NMR
Gene Ontology	Chain Function Process Component A
Primary reference	An ARC/Mediator subunit required for SREBP control of cholesterol and lipid homeostasis., Yang F, Vought BW, Satterlee JS, Walker AK, Jim Sun ZY, Watts JL, Debeaumont R, Mako Saito R, Hyberts SG, Yang S, Macol C, Iyer L, Tjian R, van den Heuvel S, Hart AC, Wagner G, Naar AM, Nature. 2006 Jun 21;. PMID:16799563

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (367 Kb) [Save to disk] Biological Unit Coordinates (2gut.pdb1.gz) 24 Kb CSU: Contacts of Structural Units for 2GUT Original NMR restraints for 2GUT from PDB Retrieve 2GUT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2GUT from S2C, [Save to disk]

View 2GUT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2GUT

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2GUT, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2gut] [2gut_A] SWISS-PROT database: [Q96RN5] Domain organization of [MED15_HUMAN] by SWISSPFAM

Other resources with information on 2GUT

Community annotation for 2GUT at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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