2GW2 Isomerase date May 03, 2006
title Crystal Structure Of The Peptidyl-Prolyl Isomerase Domain Of Cyclophilin G
authors G.Bernstein, W.Tempel, T.Davis, E.M.Newman, P.J.Finerty Jr., F.Ma J.Weigelt, M.Sundstrom, C.H.Arrowsmith, A.M.Edwards, A.Bochkare Paganon, Structural Genomics Consortium (Sgc)
compound source
Molecule: Peptidyl-Prolyl Cis-Trans Isomerase G
Chain: A
Fragment: Residues 1-179
Synonym: Peptidyl-Prolyl Isomerase G, Ppiase G, Rotamase G, Cyclophilin G, Clk-Associating Rs-Cyclophilin, Cars-Cycloph Cars-Cyp, Sr-Cyclophilin, Srcyp, Sr-Cyp, Casp10;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ppig
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Codon Plus Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 21 21 21
R_factor 0.217 R_Free 0.279
length a length b length c angle alpha angle beta angle gamma
37.432 65.504 69.341 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand UNX enzyme Isomerase E.C. BRENDA

Primary referenceStructural and biochemical characterization of the human cyclophilin family of peptidyl-prolyl isomerases., Davis TL, Walker JR, Campagna-Slater V, Finerty PJ, Paramanathan R, Bernstein G, MacKenzie F, Tempel W, Ouyang H, Lee WH, Eisenmesser EZ, Dhe-Paganon S, PLoS Biol. 2010 Jul 27;8(7):e1000439. doi: 10.1371/journal.pbio.1000439. PMID:20676357
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • Biological Unit Coordinates (2gw2.pdb1.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 2GW2
  • CSU: Contacts of Structural Units for 2GW2
  • Likely Quarternary Molecular Structure file(s) for 2GW2
  • Structure Factors (314 Kb)
  • Retrieve 2GW2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GW2 from S2C, [Save to disk]
  • Re-refined 2gw2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GW2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GW2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2GW2, from MSDmotif at EBI
  • Fold representative 2gw2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gw2] [2gw2_A]
  • SWISS-PROT database: [Q13427]
  • Domain organization of [PPIG_HUMAN] by SWISSPFAM
  • Other resources with information on 2GW2
  • Community annotation for 2GW2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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