2GW3	Luminescent Protein	date	May 03, 2006
title	Crystal Structure Of Stony Coral Fluorescent Protein Kaede,
authors	I.Hayashi, H.Mizuno, A.Miyawaki, M.Ikura
compound		source
Molecule: Kaede Chain: A, B Engineered: Yes		Organism_scientific: Trachyphyllia Geoffroyi Organism_taxid: 196280 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Prsetb
symmetry	Space Group: C 1 2 1	R_factor 0.197 R_Free 0.214
crystal cell	length a length b length c angle alpha angle beta angle gamma 132.496 80.476 53.528 90.00 113.82 90.00
method	X-Ray Diffraction	resolution	1.40 Å
ligand	CR8, NI	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystallographic evidence for water-assisted photo-induced peptide cleavage in the stony coral fluorescent protein Kaede., Hayashi I, Mizuno H, Tong KI, Furuta T, Tanaka F, Yoshimura M, Miyawaki A, Ikura M, J Mol Biol. 2007 Sep 28;372(4):918-26. Epub 2007 Jun 19. PMID:17692334

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk] Biological Unit Coordinates (2gw3.pdb1.gz) 153 Kb LPC: Ligand-Protein Contacts for 2GW3 CSU: Contacts of Structural Units for 2GW3 Likely Quarternary Molecular Structure file(s) for 2GW3 Structure Factors (1620 Kb) Retrieve 2GW3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2GW3 from S2C, [Save to disk] Re-refined 2gw3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2GW3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2GW3

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2GW3, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2gw3] [2gw3_A] [2gw3_B] SWISS-PROT database: [Q8I6J8] Domain organization of [Q8I6J8_9CNID] by SWISSPFAM

Other resources with information on 2GW3

Community annotation for 2GW3 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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