2GW6 Protein Binding date May 03, 2006
title Nmr Structure Of The Human Trna Endonuclease Sen15 Subunit
authors J.Song, J.L.Markley, Center For Eukaryotic Structural Genomics
compound source
Molecule: Trna-Splicing Endonuclease Subunit Sen15
Chain: A, B
Synonym: Trna-Intron Endonuclease Sen15, Hssen15
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tsen15, C1orf19, Sen15
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rossetta2(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pvp13
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThree-dimensional structure determined for a subunit of human tRNA splicing endonuclease (Sen15) reveals a novel dimeric fold., Song J, Markley JL, J Mol Biol. 2007 Feb 9;366(1):155-64. Epub 2006 Nov 11. PMID:17166513
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1433 Kb) [Save to disk]
  • Biological Unit Coordinates (2gw6.pdb1.gz) 71 Kb
  • CSU: Contacts of Structural Units for 2GW6
  • Original NMR restraints for 2GW6 from PDB
  • Retrieve 2GW6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GW6 from S2C, [Save to disk]
    • View 2GW6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2GW6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GW6, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gw6_A] [2gw6_B] [2gw6]
  • SWISS-PROT database: [Q8WW01]
  • Domain organization of [SEN15_HUMAN] by SWISSPFAM
    • Other resources with information on 2GW6
  • Community annotation for 2GW6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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