2GZU Transcription Regulator date May 12, 2006
title High-Resolution Structure Determination Of The Cylr2 Homodim Intermonomer Distances From Paramagnetic Relaxation Enhance Nmr Dipolar Couplings
authors S.Rumpel, S.Becker, M.Zweckstetter
compound source
Molecule: Cytolysin Regulator 2
Chain: A, B
Synonym: Cylr2
Engineered: Yes
 Organism_scientific: Enterococcus Faecalis
Organism_taxid: 1351
Gene: Cylr2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceHigh-resolution structure determination of the CylR2 homodimer using paramagnetic relaxation enhancement and structure-based prediction of molecular alignment., Rumpel S, Becker S, Zweckstetter M, J Biomol NMR. 2008 Jan;40(1):1-13. Epub 2007 Nov 20. PMID:18026911
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (654 Kb) [Save to disk]
  • Biological Unit Coordinates (2gzu.pdb1.gz) 43 Kb
  • CSU: Contacts of Structural Units for 2GZU
  • Original NMR restraints for 2GZU from PDB
  • Retrieve 2GZU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GZU from S2C, [Save to disk]
    • View 2GZU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2GZU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GZU, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gzu_A] [2gzu] [2gzu_B]
  • SWISS-PROT database: [Q8VL32]
  • Domain organization of [Q8VL32_ENTFA] by SWISSPFAM
  • Domain found in 2GZU: [HTH_XRE ] by SMART
    • Other resources with information on 2GZU
  • Community annotation for 2GZU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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