2GZV	Signaling Protein	date	May 12, 2006
title	The Cystal Structure Of The Pdz Domain Of Human Pick1
authors	J.E.Debreczeni, J.M.Elkins, X.Yang, G.Berridge, J.Bray, S.Colebro C.Smee, P.Savitsky, O.Gileadi, A.Turnbull, F.Von Delft, D.A.Doyl M.Sundstrom, C.Arrowsmith, J.Weigelt, A.Edwards, Structural Gen Consortium (Sgc)
compound		source
Molecule: Prkca-Binding Protein Chain: A Fragment: Pdz Domain, Residues 19-105 Synonym: Protein Kinase C-Alpha-Binding Protein, Protein In With C Kinase 1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pick1, Prkcabp Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)-R3rosetta Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic28-Bsa4
symmetry	Space Group: C 1 2 1	R_factor 0.149 R_Free 0.169
crystal cell	length a length b length c angle alpha angle beta angle gamma 79.588 37.257 29.442 90.00 95.75 90.00
method	X-Ray Diffraction	resolution	1.12 Å
note	2GZV is a representative structure
Primary reference	Structure of PICK1 and other PDZ domains obtained with the help of self-binding C-terminal extensions., Elkins JM, Papagrigoriou E, Berridge G, Yang X, Phillips C, Gileadi C, Savitsky P, Doyle DA, Protein Sci. 2007 Apr;16(4):683-94. PMID:17384233

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk] Biological Unit Coordinates (2gzv.pdb1.gz) 35 Kb Biological Unit Coordinates (2gzv.pdb2.gz) 68 Kb CSU: Contacts of Structural Units for 2GZV Likely Quarternary Molecular Structure file(s) for 2GZV Structure Factors (453 Kb) Retrieve 2GZV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2GZV from S2C, [Save to disk] Re-refined 2gzv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2GZV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2GZV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2GZV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2gzv_A] [2gzv] SWISS-PROT database: [Q9NRD5] Domain organization of [PICK1_HUMAN] by SWISSPFAM Domain found in 2GZV: [PDZ ] by SMART

Other resources with information on 2GZV

Community annotation for 2GZV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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