2H24 Cytokine date May 18, 2006
title Crystal Structure Of Human Il-10
authors S.I.Yoon, M.R.Walter
compound source
Molecule: Interleukin-10
Chain: A
Synonym: Il-10, Cytokine Synthesis Inhibitory Factor, Csif
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43 21 2
R_factor 0.204 R_Free 0.254
length a length b length c angle alpha angle beta angle gamma
36.370 36.370 220.970 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å

Primary referenceConformational changes mediate IL-10R2 binding to IL-10 and assembly of the signaling complex., Yoon SI, Logsdon NJ, Sheikh F, Donnelly RP, Walter MR, J Biol Chem. 2006 Sep 18;. PMID:16982608
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (2h24.pdb1.gz) 50 Kb
  • CSU: Contacts of Structural Units for 2H24
  • Likely Quarternary Molecular Structure file(s) for 2H24
  • Structure Factors (72 Kb)
  • Retrieve 2H24 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2H24 from S2C, [Save to disk]
  • Re-refined 2h24 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2H24 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2H24
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2H24, from MSDmotif at EBI
  • Fold representative 2h24 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2h24] [2h24_A]
  • SWISS-PROT database: [P22301]
  • Domain organization of [IL10_HUMAN] by SWISSPFAM
  • Domain found in 2H24: [IL10 ] by SMART
  • Other resources with information on 2H24
  • Community annotation for 2H24 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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