2H2R Immune System date May 19, 2006
title Crystal Structure Of The Human Cd23 Lectin Domain, Apo Form
authors B.A.Wurzburg
compound source
Molecule: Low Affinity Immunoglobulin Epsilon Fc Receptor ( Ige Receptor) (Fc-Epsilon-Rii)(Immunoglobulin E-Binding Fac Antigen);
Chain: A, B
Fragment: Lectin Domain
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fcer2
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_strain: Sf+
Expression_system_vector_type: Recombinant Baculovirus
Expression_system_plasmid: Pbacgus-3
symmetry Space Group: C 1 2 1
R_factor 0.124 R_Free 0.165
crystal
cell
length a length b length c angle alpha angle beta angle gamma
112.354 50.667 75.061 90.00 127.09 90.00
method X-Ray Diffractionresolution 1.50 Å
Primary referenceStructural Changes in the Lectin Domain of CD23, the Low-Affinity IgE Receptor, upon Calcium Binding., Wurzburg BA, Tarchevskaya SS, Jardetzky TS, Structure. 2006 Jun;14(6):1049-58. PMID:16765898
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (2h2r.pdb1.gz) 104 Kb
  • CSU: Contacts of Structural Units for 2H2R
  • Likely Quarternary Molecular Structure file(s) for 2H2R
  • Structure Factors (766 Kb)
  • Retrieve 2H2R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2H2R from S2C, [Save to disk]
  • Re-refined 2h2r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2H2R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2H2R
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2H2R, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2h2r_A] [2h2r] [2h2r_B]
  • SWISS-PROT database: [P06734]
  • Domain organization of [FCER2_HUMAN] by SWISSPFAM
  • Domain found in 2H2R: [CLECT ] by SMART
  • Other resources with information on 2H2R
  • Community annotation for 2H2R at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science