2H3X Oxidoreductase Electron Transport date May 23, 2006
title Crystal Structure Of An Electron Transfer Complex Between Aromatic Amine Dehydrogenase And Azurin From Alcaligenes Faecalis (Form 3)
authors N.Sukumar, Z.Chen, D.Leys, N.S.Scrutton, D.Ferrati, A.Merli, G.L.Rossi, H.D.Bellamy, A.Chistoserdov, V.L.Davidson, F.S.Mathews
compound source
Molecule: Aromatic Amine Dehydrogenase
Chain: A, D
Ec: 1.4.99.4
Organism_scientific: Alcaligenes Faecalis
Organism_taxid: 511
Strain: Ifo 14479

Molecule: Aromatic Amine Dehydrogenase
Chain: B, E
Ec: 1.4.99.4

Organism_scientific: Alcaligenes Faecalis
Organism_taxid: 511
Strain: Ifo 14479

Molecule: Azurin
Chain: C, F

Organism_scientific: Alcaligenes Faecalis
Organism_taxid: 511
Strain: Ifo 14479
symmetry Space Group: P 21 21 21
R_factor 0.183 R_Free 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.953 94.762 211.482 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand CU, TRQ enzyme Oxidoreductase E.C.1.4.99.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D


E, B


F, C
  • electron transfer activity


  • Primary referenceCrystal Structure of an Electron Transfer Complex between Aromatic Amine Dehydrogenase and Azurin from Alcaligenes faecalis(,)., Sukumar N, Chen ZW, Ferrari D, Merli A, Rossi GL, Bellamy HD, Chistoserdov A, Davidson VL, Mathews FS, Biochemistry. 2006 Nov 14;45(45):13500-13510. PMID:17087503
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (210 Kb) [Save to disk]
  • Biological Unit Coordinates (2h3x.pdb1.gz) 205 Kb
  • LPC: Ligand-Protein Contacts for 2H3X
  • CSU: Contacts of Structural Units for 2H3X
  • Likely Quarternary Molecular Structure file(s) for 2H3X
  • Structure Factors (274 Kb)
  • Retrieve 2H3X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2H3X from S2C, [Save to disk]
  • Re-refined 2h3x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2H3X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2H3X
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2H3X, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2h3x] [2h3x_F] [2h3x_C] [2h3x_B] [2h3x_E] [2h3x_A] [2h3x_D]
  • SWISS-PROT database: [P84887] [P84888] [P00281]
  • Domain organization of [AAUA_ALCFA] [AAUB_ALCFA] [AZUR_ALCFA] by SWISSPFAM
  • Other resources with information on 2H3X
  • Community annotation for 2H3X at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science