2H60 Transcription date May 30, 2006
title Solution Structure Of Human Brg1 Bromodomain
authors W.Shen, C.Xu, J.Zhang, J.Wu, Y.Shi
compound source
Molecule: Probable Global Transcription Activator Snf2l4
Chain: A
Fragment: Bromodomain
Synonym: Brahma-Related Gene 1 Protein, Brg1, Atp- Dependent Helicase Smarca4, Snf2-Beta, Brg-1 Protein, Mitotic Growth And Transcription Activator, Brahma Protein Homolog 1, Swisnf-Related Matrix-Associated Actin- Dependent Regulator Of Chromatin Subfamily A Member 4;
Ec: 3.6.1.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.6.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of human Brg1 bromodomain and its specific binding to acetylated histone tails., Shen W, Xu C, Huang W, Zhang J, Carlson JE, Tu X, Wu J, Shi Y, Biochemistry. 2007 Feb 27;46(8):2100-10. Epub 2007 Feb 3. PMID:17274598
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (335 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2H60
  • Original NMR restraints for 2H60 from PDB
  • Retrieve 2H60 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2H60 from S2C, [Save to disk]
  • View 2H60 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2H60
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2H60, from MSDmotif at EBI
  • Fold representative 2h60 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2h60] [2h60_A]
  • SWISS-PROT database: [P51532]
  • Domain organization of [SMCA4_HUMAN] by SWISSPFAM
  • Domain found in 2H60: [BROMO ] by SMART
  • Other resources with information on 2H60
  • Community annotation for 2H60 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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