2H63 Oxidoreductase date May 30, 2006
title Crystal Structure Of Human Biliverdin Reductase A
authors K.Kavanagh, J.Elkins, E.Ugochukwu, K.Guo, E.Pilka, P.Lukacik, C.Sm E.Papagrigoriou, G.Bunkoczi, M.Sundstrom, C.Arrowsmith, J.Weige A.Edwards, F.Von Delft, U.Oppermann, Structural Genomics Conso (Sgc)
compound source
Molecule: Biliverdin Reductase A
Chain: A, B, C, D
Fragment: Residues 7-296
Synonym: Biliverdin-Ix Alpha-Reductase, Bvr A
Ec: 1.3.1.24
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Blvra
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)-R3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: P 21 21 21
R_factor 0.237 R_Free 0.287
crystal
cell
length a length b length c angle alpha angle beta angle gamma
90.787 92.747 147.755 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand NAP enzyme Oxidoreductase E.C.1.3.1.24 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (176 Kb) [Save to disk]
  • Biological Unit Coordinates (2h63.pdb1.gz) 85 Kb
  • Biological Unit Coordinates (2h63.pdb2.gz) 85 Kb
  • LPC: Ligand-Protein Contacts for 2H63
  • CSU: Contacts of Structural Units for 2H63
  • Likely Quarternary Molecular Structure file(s) for 2H63
  • Structure Factors (522 Kb)
  • Retrieve 2H63 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2H63 from S2C, [Save to disk]
  • Re-refined 2h63 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2H63 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2H63
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2H63, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2h63_D] [2h63_C] [2h63_B] [2h63] [2h63_A]
  • SWISS-PROT database: [P53004]
  • Domain organization of [BIEA_HUMAN] by SWISSPFAM
  • Other resources with information on 2H63
  • Community annotation for 2H63 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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