2H7H Viral Protein Dna date Jun 02, 2006
title Crystal Structure Of The Jun Bzip Homodimer Complexed With A
authors S.S.Rajan, M.Borovilos, M.E.Cuff, Y.Kim
compound source
Molecule: 5'-D(Cpgptpcpgpaptpgpapcptpcpaptpc G)-3';
Chain: X
Engineered: Yes
 Synthetic: Yes

Molecule: 5'-D(Cpgptpcpgpaptpgpapgptpcpaptpc G)-3';
Chain: Y
Engineered: Yes
Synthetic: Yes

Molecule: Viral Jun Transforming Protein
Chain: A, B
Fragment: Basic Region Leucine Zipper Of V-Jun (Residues 21
Synonym: V-Jun
Engineered: Yes
Organism_scientific: Avian Sarcoma Virus
Organism_taxid: 11876
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Plm1
symmetry Space Group: P 1 21 1
R_factor 0.218 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.258 74.203 58.303 90.00 111.25 90.00
method X-Ray Diffractionresolution 2.30 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (2h7h.pdb1.gz) 36 Kb
  • CSU: Contacts of Structural Units for 2H7H
  • Likely Quarternary Molecular Structure file(s) for 2H7H
  • Structure Factors (106 Kb)
  • Retrieve 2H7H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2H7H from S2C, [Save to disk]
  • Re-refined 2h7h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2H7H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2H7H
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2H7H, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2h7h_X] [2h7h_Y] [2h7h_A] [2h7h] [2h7h_B]
  • SWISS-PROT database: [P05411]
  • Domain organization of [JUN_AVIS1] by SWISSPFAM
  • Domain found in 2H7H: [BRLZ ] by SMART
    • Other resources with information on 2H7H
  • Community annotation for 2H7H at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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