2HGW Transferase date Jun 27, 2006
title Crystal Structure Of Cys318ala Mutant Of Human Mitochondrial Chain Aminotransferase
authors N.H.Yennawar, S.M.Hutson
compound source
Molecule: Branched-Chain-Amino-Acid Aminotransferase, Mitoc
Chain: A, B
Synonym: Bcatm, Placental Protein 18, Pp18, Mitochondrial B Chain Aminotransferase;
Ec: 2.6.1.42
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bcat2, Bcatm, Eca40
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21de3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-28a
symmetry Space Group: P 21 21 21
R_factor 0.227 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.668 105.585 106.599 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.98 Å
ligand ACY, EPE, GOL, PLP, SO4 enzyme Transferase E.C.2.6.1.42 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceHuman mitochondrial branched chain aminotransferase isozyme: structural role of the CXXC center in catalysis., Yennawar NH, Islam MM, Conway M, Wallin R, Hutson SM, J Biol Chem. 2006 Dec 22;281(51):39660-71. Epub 2006 Oct 18. PMID:17050531
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (127 Kb) [Save to disk]
  • Biological Unit Coordinates (2hgw.pdb1.gz) 119 Kb
  • LPC: Ligand-Protein Contacts for 2HGW
  • CSU: Contacts of Structural Units for 2HGW
  • Likely Quarternary Molecular Structure file(s) for 2HGW
  • Structure Factors (484 Kb)
  • Retrieve 2HGW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HGW from S2C, [Save to disk]
  • Re-refined 2hgw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HGW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HGW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HGW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hgw_B] [2hgw_A] [2hgw]
  • SWISS-PROT database: [O15382]
  • Domain organization of [BCAT2_HUMAN] by SWISSPFAM
  • Other resources with information on 2HGW
  • Community annotation for 2HGW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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