2HIY Structural Genomics, Unknown Function date Jun 29, 2006
title The Structure Of Conserved Bacterial Protein Sp0830 From Str Pneumoniae. (Casp Target)
authors M.E.Cuff, M.Zhou, J.Abdullah, A.Joachimiak, Midwest Center For S Genomics (Mcsg)
compound source
Molecule: Hypothetical Protein
Chain: A, B, C, D
Engineered: Yes
 Organism_scientific: Streptococcus Pneumoniae
Organism_taxid: 170187
Strain: Tigr4
Gene: Sp_0830
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 1 21 1
R_factor 0.163 R_Free 0.194
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.252 108.845 65.527 90.00 97.15 90.00
method X-Ray Diffractionresolution 1.40 Å
ligand CL, GOL, MG, MSE enzyme
Gene SP
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (167 Kb) [Save to disk]
  • Biological Unit Coordinates (2hiy.pdb1.gz) 159 Kb
  • LPC: Ligand-Protein Contacts for 2HIY
  • CSU: Contacts of Structural Units for 2HIY
  • Likely Quarternary Molecular Structure file(s) for 2HIY
  • Structure Factors (1187 Kb)
  • Retrieve 2HIY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HIY from S2C, [Save to disk]
  • Re-refined 2hiy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2HIY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2HIY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HIY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hiy] [2hiy_A] [2hiy_C] [2hiy_D] [2hiy_B]
  • SWISS-PROT database: [Q97RI5]
  • Domain organization of [Q97RI5_STRPN] by SWISSPFAM
    • Other resources with information on 2HIY
  • Community annotation for 2HIY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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