2HIZ Hydrolase date Jun 29, 2006
title Crystal Structure Of Human Beta-Secretase (Bace) In The Pres Inhibitor
authors T.E.Benson, D.B.Prince, A.G.Tomasselli, T.L.Emmons, D.J.Paddock
compound source
Molecule: Beta-Secretase 1
Chain: A, B, C
Synonym: Beta-Site App Cleaving Enzyme 1, Beta-Site Amyloid Protein Cleaving Enzyme 1, Aspartyl Protease 2, Asp 2, Asp2 Membrane-Associated Aspartic Protease 2, Memapsin-2;
Ec: 3.4.23.46
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bace
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.214 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.240 104.090 100.950 90.00 103.46 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand LIJ, PO4 enzyme Hydrolase E.C.3.4.23.46 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceDesign of potent inhibitors of human beta-secretase. Part 1., Freskos JN, Fobian YM, Benson TE, Bienkowski MJ, Brown DL, Emmons TL, Heintz R, Laborde A, McDonald JJ, Mischke BV, Molyneaux JM, Moon JB, Mullins PB, Bryan Prince D, Paddock DJ, Tomasselli AG, Winterrowd G, Bioorg Med Chem Lett. 2007 Jan 1;17(1):73-7. Epub 2006 Oct 4. PMID:17046251
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (194 Kb) [Save to disk]
  • Biological Unit Coordinates (2hiz.pdb1.gz) 65 Kb
  • Biological Unit Coordinates (2hiz.pdb2.gz) 65 Kb
  • Biological Unit Coordinates (2hiz.pdb3.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 2HIZ
  • CSU: Contacts of Structural Units for 2HIZ
  • Likely Quarternary Molecular Structure file(s) for 2HIZ
  • Structure Factors (750 Kb)
  • Retrieve 2HIZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HIZ from S2C, [Save to disk]
  • Re-refined 2hiz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HIZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HIZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HIZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hiz_B] [2hiz_A] [2hiz] [2hiz_C]
  • SWISS-PROT database: [P56817]
  • Belongs to the β-amyloid cleaving enzyme (bace1) family according to TCDB.
  • Domain organization of [BACE1_HUMAN] by SWISSPFAM
  • Other resources with information on 2HIZ
  • Community annotation for 2HIZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science