2HL4 Lyase date Jul 06, 2006
title Crystal Structure Analysis Of Human Carbonic Anhydrase II In With A Benzenesulfonamide Derivative
authors A.Di Fiore, C.T.Supuran, J.Y.Winum, J.L.Montero, C.Pedone, A.Sc G.De Simone
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Synonym: Carbonic Anhydrase II, Carbonate Dehydratase II, C Carbonic Anhydrase C;
Ec: 4.2.1.1
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Sigma-Aldrich Co.
symmetry Space Group: P 1 21 1
R_factor 0.176 R_Free 0.198
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.070 41.120 72.060 90.00 104.51 90.00
method X-Ray Diffractionresolution 1.55 Å
ligand BO1, CL, GOL, MBO, ZN BindingDB enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCarbonic anhydrase inhibitors: binding of an antiglaucoma glycosyl-sulfanilamide derivative to human isoform II and its consequences for the drug design of enzyme inhibitors incorporating sugar moieties., Di Fiore A, Scozzafava A, Winum JY, Montero JL, Pedone C, Supuran CT, De Simone G, Bioorg Med Chem Lett. 2007 Mar 15;17(6):1726-31. Epub 2007 Jan 8. PMID:17251017
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (2hl4.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 2HL4
  • CSU: Contacts of Structural Units for 2HL4
  • Likely Quarternary Molecular Structure file(s) for 2HL4
  • Structure Factors (395 Kb)
  • Retrieve 2HL4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HL4 from S2C, [Save to disk]
  • Re-refined 2hl4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HL4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HL4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HL4, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hl4] [2hl4_A]
  • SWISS-PROT database: [P00918]
  • Domain organization of [CAH2_HUMAN] by SWISSPFAM
  • Domain found in 2HL4: [Carb_anhydrase ] by SMART
  • Other resources with information on 2HL4
  • Community annotation for 2HL4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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