2HQX Transcription date Jul 19, 2006
title Crystal Structure Of Human P100 Tudor Domain Conserved Regio
authors M.Zhao, Z.J.Liu, H.Xu, J.Yang, O.Silvennoinen, B.C.Wang, Southeast Collaboratory For Structural Genomics (Secsg)
compound source
Molecule: P100 Co-Activator Tudor Domain
Chain: A, B
Fragment: Conserved Region
Synonym: P100 Co-Activator, 100 Kda Coactivator, Ebna2 Coac P100;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Snd1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor 0.229 R_Free 0.270
crystal
cell
length a length b length c angle alpha angle beta angle gamma
30.777 37.684 40.202 90.03 105.32 99.72
method X-Ray Diffractionresolution 1.42 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (2hqx.pdb1.gz) 32 Kb
  • CSU: Contacts of Structural Units for 2HQX
  • Likely Quarternary Molecular Structure file(s) for 2HQX
  • Structure Factors (484 Kb)
  • Retrieve 2HQX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HQX from S2C, [Save to disk]
  • Re-refined 2hqx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2HQX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2HQX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HQX, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hqx_A] [2hqx_B] [2hqx]
  • SWISS-PROT database: [Q7KZF4]
  • Domain organization of [SND1_HUMAN] by SWISSPFAM
  • Domain found in 2HQX: [TUDOR ] by SMART
    • Other resources with information on 2HQX
  • Community annotation for 2HQX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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