2HRR Hydrolase date Jul 20, 2006
title Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1) I Complex With The Nerve Agent Tabun (Ga)
authors C.D.Fleming, M.R.Redinbo
compound source
Molecule: Liver Carboxylesterase 1
Chain: A, B, C
Synonym: Acyl Coenzyme A:Cholesterol Acyltransferase, Acat, Monocytemacrophage Serine Esterase, Hmse, Serine Esterase Carboxylesterase Hbr1, Triacylglycerol Hydrolase, Tgh, Egas
Ec: 3.1.1.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ces1
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: P 21 21 21
R_factor 0.167 R_Free 0.232
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.570 181.050 202.920 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand FRU, GLC, NAG, NTJ, SIA, SO4 enzyme Hydrolase E.C.3.1.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B
  • cholesterol ester hydrolysis...

  • Primary referenceCrystal Structures of Human Carboxylesterase 1 in Covalent Complexes with the Chemical Warfare Agents Soman and Tabun(,)., Fleming CD, Edwards CC, Kirby SD, Maxwell DM, Potter PM, Cerasoli DM, Redinbo MR, Biochemistry. 2007 May 1;46(17):5063-5071. Epub 2007 Apr 4. PMID:17407327
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (272 Kb) [Save to disk]
  • Biological Unit Coordinates (2hrr.pdb1.gz) 265 Kb
  • LPC: Ligand-Protein Contacts for 2HRR
  • CSU: Contacts of Structural Units for 2HRR
  • Likely Quarternary Molecular Structure file(s) for 2HRR
  • Structure Factors (732 Kb)
  • Retrieve 2HRR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HRR from S2C, [Save to disk]
  • Re-refined 2hrr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HRR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HRR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HRR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hrr_A] [2hrr] [2hrr_B] [2hrr_C]
  • SWISS-PROT database: [P23141]
  • Domain organization of [EST1_HUMAN] by SWISSPFAM
  • Other resources with information on 2HRR
  • Community annotation for 2HRR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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