2HTU Hydrolase date Jul 26, 2006
title N8 Neuraminidase In Complex With Peramivir
authors R.J.Russell, L.F.Haire, D.J.Stevens, P.J.Collins, Y.P.Lin, G.M.Bl A.J.Hay, S.J.Gamblin, J.J.Skehel
compound source
Molecule: Neuraminidase
Chain: A
Ec: 3.2.1.18
Organism_scientific: Influenza A Virus
Organism_taxid: 11320
symmetry Space Group: I 4
R_factor 0.222 R_Free 0.286
crystal
cell
length a length b length c angle alpha angle beta angle gamma
89.720 89.720 93.540 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand BCZ enzyme Hydrolase E.C.3.2.1.18 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structure of H5N1 avian influenza neuraminidase suggests new opportunities for drug design., Russell RJ, Haire LF, Stevens DJ, Collins PJ, Lin YP, Blackburn GM, Hay AJ, Gamblin SJ, Skehel JJ, Nature. 2006 Aug 16;. PMID:16915235
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk]
  • Biological Unit Coordinates (2htu.pdb1.gz) 240 Kb
  • LPC: Ligand-Protein Contacts for 2HTU
  • CSU: Contacts of Structural Units for 2HTU
  • Likely Quarternary Molecular Structure file(s) for 2HTU
  • Structure Factors (155 Kb)
  • Retrieve 2HTU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HTU from S2C, [Save to disk]
  • Re-refined 2htu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HTU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HTU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HTU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2htu] [2htu_A]
  • SWISS-PROT database: [Q07599]
  • Domain organization of [NRAM_I63A3] by SWISSPFAM
  • Other resources with information on 2HTU
  • Community annotation for 2HTU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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