2HVZ Rna Binding Protein date Jul 31, 2006
title Solution Structure Of The Rrm Domain Of Sr Rich Factor 9g8
authors A.M.Tintaru, G.M.Hautbergue, A.P.Golovanov, L.Y.Lian, S.A.Wilson
compound source
Molecule: Splicing Factor, Arginineserine-Rich 7
Chain: A
Fragment: Rrm (Amino Acids K12-R98)
Synonym: Splicing Factor 9g8
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sfrs7
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21rp
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet24b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMolecular basis of RNA recognition and TAP binding by the SR proteins SRp20 and 9G8., Hargous Y, Hautbergue GM, Tintaru AM, Skrisovska L, Golovanov AP, Stevenin J, Lian LY, Wilson SA, Allain FH, EMBO J. 2006 Nov 1;25(21):5126-37. Epub 2006 Oct 12. PMID:17036044
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (622 Kb) [Save to disk]
  • Biological Unit Coordinates (2hvz.pdb1.gz) 31 Kb
  • CSU: Contacts of Structural Units for 2HVZ
  • Original NMR restraints for 2HVZ from PDB
  • Retrieve 2HVZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HVZ from S2C, [Save to disk]
    • View 2HVZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2HVZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HVZ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hvz_A] [2hvz]
  • SWISS-PROT database: [Q16629]
  • Domain organization of [SFRS7_HUMAN] by SWISSPFAM
  • Domain found in 2HVZ: [RRM ] by SMART
    • Other resources with information on 2HVZ
  • Community annotation for 2HVZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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