2HXP Hydrolase date Aug 03, 2006
title Crystal Structure Of The Human Phosphatase (Dusp9)
authors M.Madegowda, S.Eswaramoorthy, S.K.Burley, S.Swaminathan, New Yor Research Center For Structural Genomics (Nysgxrc)
compound source
Molecule: Dual Specificity Protein Phosphatase 9
Chain: A
Fragment: Residues 201-345
Ec: 3.1.3.48
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dusp9, Mkp4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 32
R_factor 0.216 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.527 50.527 59.851 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.83 Å
ligand PO4 enzyme Hydrolase E.C.3.1.3.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural genomics of protein phosphatases., Almo SC, Bonanno JB, Sauder JM, Emtage S, Dilorenzo TP, Malashkevich V, Wasserman SR, Swaminathan S, Eswaramoorthy S, Agarwal R, Kumaran D, Madegowda M, Ragumani S, Patskovsky Y, Alvarado J, Ramagopal UA, Faber-Barata J, Chance MR, Sali A, Fiser A, Zhang ZY, Lawrence DS, Burley SK, J Struct Funct Genomics. 2007 Sep;8(2-3):121-40. Epub 2007 Dec 5. PMID:18058037
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (2hxp.pdb1.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 2HXP
  • CSU: Contacts of Structural Units for 2HXP
  • Likely Quarternary Molecular Structure file(s) for 2HXP
  • Structure Factors (111 Kb)
  • Retrieve 2HXP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HXP from S2C, [Save to disk]
  • Re-refined 2hxp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HXP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HXP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HXP, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hxp_A] [2hxp]
  • SWISS-PROT database: [Q99956]
  • Domain organization of [DUS9_HUMAN] by SWISSPFAM
  • Domain found in 2HXP: [DSPc ] by SMART
  • Other resources with information on 2HXP
  • Community annotation for 2HXP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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