2HXZ Hydrolase date Aug 04, 2006
title Crystal Structure Of Cathepsin S In Complex With A Nonpeptid Inhibitor (Hexagonal Spacegroup)
authors A.W.Patterson, W.J.Wood, M.Hornsby, S.Lesley, G.Spraggon, J.A.Ell
compound source
Molecule: Cathepsin S
Chain: A, B, C
Ec: 3.4.22.27
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ctss
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: P 65 2 2
R_factor 0.219 R_Free 0.238
crystal
cell
length a length b length c angle alpha angle beta angle gamma
165.928 165.928 142.082 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.90 Å
ligand H7J, SO4 enzyme Hydrolase E.C.3.4.22.27 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceIdentification of selective, nonpeptidic nitrile inhibitors of cathepsin s using the substrate activity screening method., Patterson AW, Wood WJ, Hornsby M, Lesley S, Spraggon G, Ellman JA, J Med Chem. 2006 Oct 19;49(21):6298-307. PMID:17034136
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (121 Kb) [Save to disk]
  • Biological Unit Coordinates (2hxz.pdb1.gz) 41 Kb
  • Biological Unit Coordinates (2hxz.pdb2.gz) 40 Kb
  • Biological Unit Coordinates (2hxz.pdb3.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 2HXZ
  • CSU: Contacts of Structural Units for 2HXZ
  • Likely Quarternary Molecular Structure file(s) for 2HXZ
  • Retrieve 2HXZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HXZ from S2C, [Save to disk]
  • View 2HXZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HXZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HXZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hxz_B] [2hxz] [2hxz_C] [2hxz_A]
  • SWISS-PROT database: [P25774]
  • Domain organization of [CATS_HUMAN] by SWISSPFAM
  • Domain found in 2HXZ: [Pept_C1 ] by SMART
  • Other resources with information on 2HXZ
  • Community annotation for 2HXZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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