2HYM Immune System date Aug 07, 2006
title Nmr Based Docking Model Of The Complex Between The Human Type I Interferon Receptor And Human Interferon Alpha-2
authors S.R.Quadt-Akabayov, J.H.Chill, R.Levy, N.Kessler, J.Anglister
compound source
Molecule: Soluble Ifn Alphabeta Receptor
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ifnabr
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Interferon Alpha-2
Chain: B
Synonym: Interferon Alpha-A, Leif A, Interferon Alpha 2a
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ifna2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceDetermination of the human type I interferon receptor binding site on human interferon-{alpha}2 by cross saturation and an NMR-based model of the complex., Quadt-Akabayov SR, Chill JH, Levy R, Kessler N, Anglister J, Protein Sci. 2006 Sep 25;. PMID:17001036
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1131 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2HYM
  • Original NMR restraints for 2HYM from PDB
  • Retrieve 2HYM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HYM from S2C, [Save to disk]
  • View 2HYM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HYM
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2HYM, from MSDmotif at EBI
  • Fold representative 2hym from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hym_B] [2hym] [2hym_A]
  • SWISS-PROT database: [P01563] [Q15467]
  • Domain organization of [IFNA2_HUMAN] [Q15467_HUMAN] by SWISSPFAM
  • Domain found in 2HYM: [IFabd ] by SMART
  • Other resources with information on 2HYM
  • Community annotation for 2HYM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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