2HYV Metal Binding Protein date Aug 07, 2006
title Human Annexin A2 With Heparin Hexasaccharide Bound
authors C.Shao, J.F.Head, B.A.Seaton
compound source
Molecule: Annexin A2
Chain: A
Synonym: Annexin II, Lipocortin II, Calpactin I Heavy Chain Chromobindin-8, P36, Protein I, Placental Anticoagulant Pro Pap-Iv;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Anxa2
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Paed4.91
symmetry Space Group: P 21 21 2
R_factor 0.212 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
107.709 54.292 68.571 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.42 Å
ligand CA, IDS, SGN, UAP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • phospholipase inhibitor acti...
  • serine-type endopeptidase in...
  • calcium channel activity
  • phospholipase A2 inhibitor a...
  • cadherin binding involved in...


  • Primary referenceCrystallographic analysis of calcium-dependent heparin binding to annexin A2., Shao C, Zhang F, Kemp MM, Linhardt RJ, Waisman DM, Head JF, Seaton BA, J Biol Chem. 2006 Oct 20;281(42):31689-95. Epub 2006 Aug 1. PMID:16882661
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (2hyv.pdb1.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 2HYV
  • CSU: Contacts of Structural Units for 2HYV
  • Likely Quarternary Molecular Structure file(s) for 2HYV
  • Structure Factors (1154 Kb)
  • Retrieve 2HYV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HYV from S2C, [Save to disk]
  • Re-refined 2hyv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HYV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HYV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HYV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hyv_A] [2hyv]
  • SWISS-PROT database: [P07355]
  • Belongs to the annexin (annexin) family according to TCDB.
  • Domain organization of [ANXA2_HUMAN] by SWISSPFAM
  • Domain found in 2HYV: [ANX ] by SMART
  • Other resources with information on 2HYV
  • Community annotation for 2HYV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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