2HZT Transcription Regulator date Aug 09, 2006
title Crystal Structure Of A Putative Hth-Type Transcriptional Reg Ytcd
authors M.Madegowda, S.Eswaramoorthy, K.Desigan, S.K.Burley, S.Swaminath York Sgx Research Center For Structural Genomics (Nysgxrc)
compound source
Molecule: Putative Hth-Type Transcriptional Regulator Ytcd
Chain: A, B, C, D
Engineered: Yes
 Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.236 R_Free 0.282
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.273 45.521 230.276 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand CSU, MSE enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (2hzt.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (2hzt.pdb2.gz) 34 Kb
  • LPC: Ligand-Protein Contacts for 2HZT
  • CSU: Contacts of Structural Units for 2HZT
  • Likely Quarternary Molecular Structure file(s) for 2HZT
  • Structure Factors (412 Kb)
  • Retrieve 2HZT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HZT from S2C, [Save to disk]
  • Re-refined 2hzt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2HZT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2HZT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HZT, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hzt_A] [2hzt_D] [2hzt_C] [2hzt] [2hzt_B]
  • SWISS-PROT database: [O34533]
  • Domain organization of [YTCD_BACSU] by SWISSPFAM
    • Other resources with information on 2HZT
  • Community annotation for 2HZT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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