2I1B Cytokine date Jan 02, 1990
title Crystallographic Refinement Of Interleukin-1 Beta At 2.0 Ang Resolution
authors J.P.Priestle, H.P.Schaer, M.G.Gruetter
compound source
Molecule: Interleukin-1 Beta
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.900 54.900 76.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
related structures by homologous chain: 1I1B, 1L2H
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystallographic refinement of interleukin 1 beta at 2.0 A resolution., Priestle JP, Schar HP, Grutter MG, Proc Natl Acad Sci U S A 1989 Dec;86(24):9667-71. PMID:2602367
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (2i1b.pdb1.gz) 28 Kb
  • CSU: Contacts of Structural Units for 2I1B
  • Likely Quarternary Molecular Structure file(s) for 2I1B
  • Retrieve 2I1B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2I1B from S2C, [Save to disk]
  • View 2I1B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2I1B
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2I1B, from MSDmotif at EBI
  • Genome occurence of 2I1B's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2i1b__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 2i1b from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2i1b_A] [2i1b]
  • SWISS-PROT database: [P01584]
  • Belongs to the interleukin 1 (il1) family according to TCDB.
  • Domain organization of [IL1B_HUMAN] by SWISSPFAM
  • Domain found in 2I1B: [IL1 ] by SMART
  • Other resources with information on 2I1B
  • Community annotation for 2I1B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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