2I1L Transferase date Aug 14, 2006
title Crystal Structure Of The C2 Form Of Fad Synthetase From Ther Maritima
authors W.Wang, D.H.Shin, H.Yokota, R.Kim, S.H.Kim, Berkeley Structural Center (Bsgc)
compound source
Molecule: Riboflavin Kinasefmn Adenylyltransferase
Chain: A, B
Engineered: Yes
Organism_scientific: Thermotoga Maritima
Organism_taxid: 2336
Gene: Tm_0857
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pet21, Psjs1240
symmetry Space Group: C 1 2 1
R_factor 0.238 R_Free 0.281
crystal
cell
length a length b length c angle alpha angle beta angle gamma
95.187 117.647 79.270 90.00 126.79 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand MSE enzyme
Gene TM
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (2i1l.pdb1.gz) 45 Kb
  • Biological Unit Coordinates (2i1l.pdb2.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 2I1L
  • CSU: Contacts of Structural Units for 2I1L
  • Likely Quarternary Molecular Structure file(s) for 2I1L
  • Structure Factors (379 Kb)
  • Retrieve 2I1L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2I1L from S2C, [Save to disk]
  • Re-refined 2i1l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2I1L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2I1L
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2I1L, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2i1l] [2i1l_B] [2i1l_A]
  • SWISS-PROT database: [Q9WZW1]
  • Domain organization of [Q9WZW1_THEMA] by SWISSPFAM
  • Domain found in 2I1L: [Flavokinase ] by SMART
  • Other resources with information on 2I1L
  • Community annotation for 2I1L at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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