2I3B Hydrolase date Aug 17, 2006
title Solution Structure Of A Human Cancer-Related Nucleoside Trip
authors W.J.Placzek, M.S.Almeida, K.Wuthrich
compound source
Molecule: Human Cancer-Related Ntpase
Chain: A
Synonym: Hcr-Ntpase
Ec: 3.6.1.15
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cdrt1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21d
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.6.1.15 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR Structure and Functional Characterization of a Human Cancer-related Nucleoside Triphosphatase., Placzek WJ, Almeida MS, Wuthrich K, J Mol Biol. 2007 Mar 30;367(3):788-801. Epub 2007 Jan 9. PMID:17291528
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (988 Kb) [Save to disk]
  • Biological Unit Coordinates (2i3b.pdb1.gz) 49 Kb
  • CSU: Contacts of Structural Units for 2I3B
  • Original NMR restraints for 2I3B from PDB
  • Retrieve 2I3B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2I3B from S2C, [Save to disk]
    • View 2I3B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2I3B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2I3B, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2i3b_A] [2i3b]
  • SWISS-PROT database: [Q9BSD7]
  • Domain organization of [CA057_HUMAN] by SWISSPFAM
    • Other resources with information on 2I3B
  • Community annotation for 2I3B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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