2I5L Gene Regulation date Aug 25, 2006
title Crystal Structure Of Bacillus Subtilis Cold Shock Protein Va Cspb M1re3kk65i
authors K.E.A.Max, U.Heinemann
compound source
Molecule: Cold Shock Protein Cspb
Chain: X
Synonym: Major Cold Shock Protein
Engineered: Yes
Mutation: Yes
Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Gene: Cspb, Cspa
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11
symmetry Space Group: P 43 21 2
R_factor 0.227 R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.500 55.500 55.470 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.55 Å
Gene
Ontology
ChainFunctionProcessComponent
X
  • transcription antiterminatio...


  • Primary referenceOptimized variants of the cold shock protein from in vitro selection: structural basis of their high thermostability., Max KE, Wunderlich M, Roske Y, Schmid FX, Heinemann U, J Mol Biol. 2007 Jun 15;369(4):1087-97. Epub 2007 Apr 12. PMID:17481655
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk]
  • Biological Unit Coordinates (2i5l.pdb1.gz) 11 Kb
  • CSU: Contacts of Structural Units for 2I5L
  • Likely Quarternary Molecular Structure file(s) for 2I5L
  • Structure Factors (24 Kb)
  • Retrieve 2I5L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2I5L from S2C, [Save to disk]
  • Re-refined 2i5l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2I5L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2I5L
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2I5L, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2i5l] [2i5l_X]
  • SWISS-PROT database: [P32081]
  • Domain organization of [CSPB_BACSU] by SWISSPFAM
  • Domain found in 2I5L: [CSP ] by SMART
  • Other resources with information on 2I5L
  • Community annotation for 2I5L at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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