2I5T Structural Genomics, Unknown Function date Aug 25, 2006
title Crystal Structure Of Hypothetical Protein Loc79017 From Homo
authors E.Bae, G.E.Wesenberg, G.N.Phillips Jr., E.Bitto, C.A.Bingman, Cen Eukaryotic Structural Genomics (Cesg)
compound source
Molecule: Protein C7orf24
Chain: A, B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: C7orf24
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl834(De3) Prare2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pvp 30
symmetry Space Group: P 21 21 21
R_factor 0.183 R_Free 0.234
length a length b length c angle alpha angle beta angle gamma
35.052 100.138 102.498 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.01 Å
ligand MSE enzyme
A, B

Primary referenceCrystal structure of Homo sapiens protein LOC79017., Bae E, Bingman CA, Aceti DJ, Phillips GN Jr, Proteins. 2008 Feb 1;70(2):588-91. PMID:17932939
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (2i5t.pdb1.gz) 31 Kb
  • Biological Unit Coordinates (2i5t.pdb2.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 2I5T
  • CSU: Contacts of Structural Units for 2I5T
  • Likely Quarternary Molecular Structure file(s) for 2I5T
  • Structure Factors (590 Kb)
  • Retrieve 2I5T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2I5T from S2C, [Save to disk]
  • Re-refined 2i5t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2I5T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2I5T
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2I5T, from MSDmotif at EBI
  • Fold representative 2i5t from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2i5t] [2i5t_A] [2i5t_B]
  • SWISS-PROT database: [O75223]
  • Domain organization of [GGCT_HUMAN] by SWISSPFAM
  • Other resources with information on 2I5T
  • Community annotation for 2I5T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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